Index Fungorum
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Index Fungorum
''Index Fungorum'' is an international project to index all formal names ( scientific names) in the fungus kingdom. the project is based at the Royal Botanic Gardens, Kew, one of three partners along with Landcare Research and the Institute of Microbiology, Chinese Academy of Sciences. It is somewhat comparable to the International Plant Names Index (IPNI), in which the Royal Botanic Gardens is also involved. A difference is that where IPNI does not indicate correct names, the ''Index Fungorum'' does indicate the status of a name. In the returns from the search page a currently correct name is indicated in green, while others are in blue (a few, aberrant usages of names are indicated in red). All names are linked to pages giving the correct name, with lists of synonyms. ''Index Fungorum'' is one of three nomenclatural repositories recognized by the Nomenclature Committee for Fungi; the others are ''MycoBank'' and ''Fungal Names''. Current names in ''Index Fungorum'' (''Speci ...
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Database
In computing, a database is an organized collection of data stored and accessed electronically. Small databases can be stored on a file system, while large databases are hosted on computer clusters or cloud storage. The design of databases spans formal techniques and practical considerations, including data modeling, efficient data representation and storage, query languages, security and privacy of sensitive data, and distributed computing issues, including supporting concurrent access and fault tolerance. A database management system (DBMS) is the software that interacts with end users, applications, and the database itself to capture and analyze the data. The DBMS software additionally encompasses the core facilities provided to administer the database. The sum total of the database, the DBMS and the associated applications can be referred to as a database system. Often the term "database" is also used loosely to refer to any of the DBMS, the database system or an appli ...
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Fungal Names
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from the other eukaryotic kingdoms, which by one traditional classification include Plantae, Animalia, Protozoa, and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''true fungi ...
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Index Kewensis
The 1893 ''Index Kewensis'' (IK), maintained by the Royal Botanic Gardens, Kew, is a publication that aims to register all botanical names for seed plants at the rank of species and genera. It later came to include names of taxonomic families and ranks below that of species. The ''Index'' is currently maintained as part of the International Plant Names Index in combination with the Gray Herbarium and Australian Plant Name indexes. This database is anticipated to complete the task of creating a complete list of plant names, although it does not determine which are accepted species names. History The preparation for this venture was made by Benjamin Daydon Jackson of the Linnaean Society, directed by Joseph Dalton Hooker at Kew. Charles Darwin provided the funding for the indexing project. When he died in 1882 his will stipulated that provision be made for £250 per annum over a 5-year period. In providing citations of plant names, the starting point was taken from 1753 onward ...
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Australian Plant Name Index
The Australian Plant Name Index (APNI) is an online database of all published names of Australian vascular plants. It covers all names, whether current names, synonyms or invalid names. It includes bibliographic and typification details, information from the Australian Plant Census including distribution by state, links to other resources such as specimen collection maps and plant photographs, and the facility for notes and comments on other aspects. History Originally the brainchild of Nancy Tyson Burbidge, it began as a four-volume printed work consisting of 3,055 pages, and containing over 60,000 plant names. Compiled by Arthur Chapman, it was part of the Australian Biological Resources Study (ABRS). In 1991 it was made available as an online database, and handed over to the Australian National Botanic Gardens. Two years later, responsibility for its maintenance was given to the newly formed Centre for Plant Biodiversity Research. Scope Recognised by Australian herbaria as the ...
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Web Services Description Language
The Web Services Description Language (WSDL ) is an XML-based interface description language that is used for describing the functionality offered by a web service. The acronym is also used for any specific WSDL description of a web service (also referred to as a ''WSDL file''), which provides a machine-readable description of how the service can be called, what parameters it expects, and what data structures it returns. Therefore, its purpose is roughly similar to that of a type signature in a programming language. The latest version of WSDL, which became a W3C recommendation in 2007, is WSDL 2.0. The meaning of the acronym has changed from version 1.1 where the "D" stood for "Definition". Description The WSDL describes services as collections of network endpoints, or ports. The WSDL specification provides an XML format for documents for this purpose. The abstract definitions of ports and messages are separated from their concrete use or instance, allowing the reuse of these ...
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SOAP
Soap is a salt of a fatty acid used in a variety of cleansing and lubricating products. In a domestic setting, soaps are surfactants usually used for washing, bathing, and other types of housekeeping. In industrial settings, soaps are used as thickeners, components of some lubricants, and precursors to catalysts. When used for cleaning, soap solubilizes particles and grime, which can then be separated from the article being cleaned. In hand washing, as a surfactant, when lathered with a little water, soap kills microorganisms by disorganizing their membrane lipid bilayer and denaturing their proteins. It also emulsifies oils, enabling them to be carried away by running water. Soap is created by mixing fats and oils with a base. A similar process is used for making detergent which is also created by combining chemical compounds in a mixer. Humans have used soap for millennia. Evidence exists for the production of soap-like materials in ancient Babylon around 2800 ...
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LSID
Life Science Identifiers are a way to name and locate pieces of information on the web. Essentially, an LSID is a unique identifier for some data, and the LSID protocol specifies a standard way to locate the data (as well as a standard way of describing that data). They are a little like DOIs used by many publishers. An LSID is represented as a uniform resource name (URN) with the following format: * urn:lsid::: The ''lsid:'' namespace, however, is not registered with the Internet Assigned Numbers Authority (IANA), and so these are not strictly URNs or URIs. LSIDs may be resolved in URLs, e.g. http://zoobank.org/urn:lsid:zoobank.org:pub:CDC8D258-8F57-41DC-B560-247E17D3DC8C Controversy over the use of LSIDs There has been a lot of interest in LSIDs in both the bioinformatics and the biodiversity communities, with the latter continuing to use them as a way of identifying species in global catalogues. However, more recently, as understanding has increased of how HTTP URIs can perfo ...
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Cross-reference
The term cross-reference (abbreviation: xref) can refer to either: * An instance within a document which refers to related information elsewhere in the same document. In both printed and online dictionaries cross-references are important because they form a network structure of relations existing between different parts of data, dictionary-internal as well as dictionary external. * In an index, a cross-reference is often denoted by ''See also''. For example, under the term ''Albert Einstein'' in the index of a book about Nobel Laureates, there may be the cross-reference ''See also: Einstein, Albert''. * In hypertext, cross-referencing is maintained to a document with either in-context (XRIC) or out-of-context (''XROC'') cross-referencing. These are similar to KWIC and KWOC. * In programming, "cross-referencing" means the listing of every file name and line number where a given named identifier occurs within the program's source tree. * In a relational database management sy ...
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CABI (organisation)
CABI (legally CAB International, formerly Commonwealth Agricultural Bureaux) is a nonprofit intergovernmental development and information organisation focusing primarily on agricultural and environmental issues in the developing world, and the creation, curation, and dissemination of scientific knowledge. Overview CABI is an international not-for-profit organisation. Their work is delivered through teams of CABI scientists and key partners working in over 40 countries across the world. CABI states its mission as "improving people’s lives worldwide by solving problems in agriculture and the environment". These problems include loss of crops caused by pests and diseases, invasive weeds and pests that damage farm production and biodiversity, and lack of global access to scientific research. Funding CABI states that only 3% of its revenue comes from core funding. Donors listed in the company's 2014 financial report include the UK's Department for International Development (£4, ...
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Royal Botanical Gardens, Kew
Royal Botanic Gardens, Kew is a non-departmental public body in the United Kingdom sponsored by the Department for Environment, Food and Rural Affairs. An internationally important botanical research and education institution, it employs 1,100 staff. Its board of trustees is chaired by Dame Amelia Fawcett. The organisation manages botanic gardens at Kew in Richmond upon Thames in south-west London, and at Wakehurst, a National Trust property in Sussex which is home to the internationally important Millennium Seed Bank, whose scientists work with partner organisations in more than 95 countries. Kew, jointly with the Forestry Commission, founded Bedgebury National Pinetum in Kent in 1923, specialising in growing conifers. In 1994, the Castle Howard Arboretum Trust, which runs the Yorkshire Arboretum, was formed as a partnership between Kew and the Castle Howard Estate. In 2019, the organisation had 2,316,699 public visitors at Kew, and 312,813 at Wakehurst. Its site at Kew h ...
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MycoBank
MycoBank is an online database, documenting new mycological names and combinations, eventually combined with descriptions and illustrations. It is run by the Westerdijk Fungal Biodiversity Institute in Utrecht. Each novelty, after being screened by nomenclatural experts and found in accordance with the ICN ( International Code of Nomenclature for algae, fungi, and plants), is allocated a unique MycoBank number before the new name has been validly published. This number then can be cited by the naming author in the publication where the new name is being introduced. Only then, this unique number becomes public in the database. By doing so, this system can help solve the problem of knowing which names have been validly published and in which year. MycoBank is linked to other important mycological databases such as ''Index Fungorum'', Life Science Identifiers, Global Biodiversity Information Facility (GBIF) and other databases. MycoBank is one of three nomenclatural repositories r ...
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