Globodera Pallida
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Globodera Pallida
''Globodera pallida'' is a species of nematode in the family Heteroderidae. It is well known as a plant pathogen, especially of potatoes. It is "one of the most economically important plant parasitic nematodes," causing major crop losses, and is a model organism used to study the biology of cyst nematodes.Cotton, J. A., et al. (2014)The genome and life-stage specific transcriptomes of ''Globodera pallida'' elucidate key aspects of plant parasitism by a cyst nematode.''Genome Biology'' 15 R43. Its common names include potato cyst nematode, white potato cyst nematode, pale potato cyst nematode, potato root eelworm,''Globodera pallida''.
Invasive Species Compendium. CABI.
golden nematode,
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Globodera Rostochiensis
''Globodera rostochiensis'', commonly known as the golden nematode, golden eelworm or yellow potato cyst nematode, is a plant pathogenic nematode. It is a pest of plants in the family Solanaceae, primarily infesting potatoes and tomatoes, as well as a variety of other root crops. Pathology The golden nematode negatively affects plants of the family Solanaceae by forming cysts on the roots of susceptible species. The cysts, which are composed of dead nematodes, are formed to protect the female's eggs and are typically yellow-brown in color. The first symptoms of infestation are typically poor plant growth, chlorosis, and wilting. Heavy infestations can lead to reduced root systems, water stress, and nutrient deficiencies, while indirect effects of an infestation include premature senescence and increased susceptibility to fungal infections. Symptoms of golden nematode infestation are not unique, and thus identification of the pest is usually performed through testing of soil sam ...
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Nematode
The nematodes ( or grc-gre, Νηματώδη; la, Nematoda) or roundworms constitute the phylum Nematoda (also called Nemathelminthes), with plant-Parasitism, parasitic nematodes also known as eelworms. They are a diverse animal phylum inhabiting a broad range of environments. Less formally, they are categorized as Helminths, but are taxonomically classified along with Arthropod, arthropods, Tardigrade, tardigrades and other moulting animalia, animals in the clade Ecdysozoa, and unlike platyhelminthe, flatworms, have tubular digestion, digestive systems with openings at both ends. Like tardigrades, they have a reduced number of Hox genes, but their sister phylum Nematomorpha has kept the ancestral protostome Hox genotype, which shows that the reduction has occurred within the nematode phylum. Nematode species can be difficult to distinguish from one another. Consequently, estimates of the number of nematode species described to date vary by author and may change rapidly over ...
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United Kingdom
The United Kingdom of Great Britain and Northern Ireland, commonly known as the United Kingdom (UK) or Britain, is a country in Europe, off the north-western coast of the continental mainland. It comprises England, Scotland, Wales and Northern Ireland. The United Kingdom includes the island of Great Britain, the north-eastern part of the island of Ireland, and many smaller islands within the British Isles. Northern Ireland shares a land border with the Republic of Ireland; otherwise, the United Kingdom is surrounded by the Atlantic Ocean, the North Sea, the English Channel, the Celtic Sea and the Irish Sea. The total area of the United Kingdom is , with an estimated 2020 population of more than 67 million people. The United Kingdom has evolved from a series of annexations, unions and separations of constituent countries over several hundred years. The Treaty of Union between the Kingdom of England (which included Wales, annexed in 1542) and the Kingdom of Scotland in 170 ...
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United States National Agricultural Library
The United States National Agricultural Library (NAL) is one of the world's largest agricultural research libraries, and serves as a national library of the United States and as the library of the United States Department of Agriculture. Located in Beltsville, Maryland, it is one of five national libraries of the United States (along with the Library of Congress, the National Library of Medicine, the National Transportation Library, and the National Library of Education). It is also the coordinator for the Agriculture Network Information Center (AgNIC), a national network of state land-grant institutions and coordinator for the U.S. Department of Agriculture (USDA) field libraries. NAL was established on May 15, 1862, by the signing of the Organic Act by Abraham Lincoln. It served as a departmental library until 1962, when the Secretary of Agriculture officially designated it as the National Agricultural Library. The first librarian, appointed in 1867, was Aaron B. Grosh, one ...
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Whole Genome Sequencing
Whole genome sequencing (WGS), also known as full genome sequencing, complete genome sequencing, or entire genome sequencing, is the process of determining the entirety, or nearly the entirety, of the DNA sequence of an organism's genome at a single time. This entails sequencing all of an organism's chromosomal DNA as well as DNA contained in the mitochondrial DNA, mitochondria and, for plants, in the chloroplast. Whole genome sequencing has largely been used as a research tool, but was being introduced to clinics in 2014. In the future of personalized medicine, whole genome sequence data may be an important tool to guide therapeutic intervention. The tool of DNA sequencing, gene sequencing at Single-nucleotide polymorphism, SNP level is also used to pinpoint functional variants from association studies and improve the knowledge available to researchers interested in evolutionary biology, and hence may lay the foundation for predicting disease susceptibility and drug response. ...
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Genome
In the fields of molecular biology and genetics, a genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as regulatory sequences (see non-coding DNA), and often a substantial fraction of 'junk' DNA with no evident function. Almost all eukaryotes have mitochondria and a small mitochondrial genome. Algae and plants also contain chloroplasts with a chloroplast genome. The study of the genome is called genomics. The genomes of many organisms have been sequenced and various regions have been annotated. The International Human Genome Project reported the sequence of the genome for ''Homo sapiens'' in 200The Human Genome Project although the initial "finished" sequence was missing 8% of the genome consisting mostly of repetitive sequences. With advancements in technology that could handle sequenci ...
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Japan
Japan ( ja, 日本, or , and formally , ''Nihonkoku'') is an island country in East Asia. It is situated in the northwest Pacific Ocean, and is bordered on the west by the Sea of Japan, while extending from the Sea of Okhotsk in the north toward the East China Sea, Philippine Sea, and Taiwan in the south. Japan is a part of the Ring of Fire, and spans Japanese archipelago, an archipelago of List of islands of Japan, 6852 islands covering ; the five main islands are Hokkaido, Honshu (the "mainland"), Shikoku, Kyushu, and Okinawa Island, Okinawa. Tokyo is the Capital of Japan, nation's capital and largest city, followed by Yokohama, Osaka, Nagoya, Sapporo, Fukuoka, Kobe, and Kyoto. Japan is the List of countries and dependencies by population, eleventh most populous country in the world, as well as one of the List of countries and dependencies by population density, most densely populated and Urbanization by country, urbanized. About three-fourths of Geography of Japan, the c ...
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Idaho
Idaho ( ) is a state in the Pacific Northwest region of the Western United States. To the north, it shares a small portion of the Canada–United States border with the province of British Columbia. It borders the states of Montana and Wyoming to the east, Nevada and Utah to the south, and Washington and Oregon to the west. The state's capital and largest city is Boise. With an area of , Idaho is the 14th largest state by land area, but with a population of approximately 1.8 million, it ranks as the 13th least populous and the 7th least densely populated of the 50 U.S. states. For thousands of years, and prior to European colonization, Idaho has been inhabited by native peoples. In the early 19th century, Idaho was considered part of the Oregon Country, an area of dispute between the U.S. and the British Empire. It officially became U.S. territory with the signing of the Oregon Treaty of 1846, but a separate Idaho Territory was not organized until 1863, instead ...
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Cultivar
A cultivar is a type of cultivated plant that people have selected for desired traits and when propagated retain those traits. Methods used to propagate cultivars include: division, root and stem cuttings, offsets, grafting, tissue culture, or carefully controlled seed production. Most cultivars arise from purposeful human manipulation, but some originate from wild plants that have distinctive characteristics. Cultivar names are chosen according to rules of the International Code of Nomenclature for Cultivated Plants (ICNCP), and not all cultivated plants qualify as cultivars. Horticulturists generally believe the word ''cultivar''''Cultivar'' () has two meanings, as explained in ''Formal definition'': it is a classification category and a taxonomic unit within the category. When referring to a taxon, the word does not apply to an individual plant but to all plants that share the unique characteristics that define the cultivar. was coined as a term meaning "cultivated variety ...
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Quarantine
A quarantine is a restriction on the movement of people, animals and goods which is intended to prevent the spread of disease or pests. It is often used in connection to disease and illness, preventing the movement of those who may have been exposed to a communicable disease, yet do not have a confirmed medical diagnosis. It is distinct from medical isolation, in which those confirmed to be infected with a communicable disease are isolated from the healthy population. Quarantine considerations are often one aspect of border control. The concept of quarantine has been known since biblical times, and is known to have been practised through history in various places. Notable quarantines in modern history include the village of Eyam in 1665 during the bubonic plague outbreak in England; East Samoa during the 1918 flu pandemic; the Diphtheria outbreak during the 1925 serum run to Nome, the 1972 Yugoslav smallpox outbreak, the SARS pandemic, the Ebola pandemic and extensive ...
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Solanum Nigrum
''Solanum nigrum'', the European black nightshade or simply black nightshade or blackberry nightshade, is a species of flowering plant in the genus ''Solanum'', native to Eurasia and introduced in the Americas, Australasia, and South Africa. Ripe berries and cooked leaves of edible strains are used as food in some locales, and plant parts are used as a traditional medicine. A tendency exists in literature to incorrectly refer to many of the other "black nightshade" species as "''Solanum nigrum''". ''Solanum nigrum'' has been recorded from deposits of the Paleolithic and Mesolithic era of ancient Britain and it is suggested by the botanist and ecologist Edward Salisbury that it was part of the native flora there before Neolithic agriculture emerged. The species was mentioned by Pliny the Elder in the first century AD and by the great herbalists, including Dioscorides. In 1753, Carl Linnaeus described six varieties of ''Solanum nigrum'' in ''Species Plantarum''. Description Black ...
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Heteroderidae
''Heteroderidae'' is a family of nematodes. The name comes from the Greek heteros = other and deras = skin (derm). This "refers to the different 'skins' of female and cyst."Tylenchida: Parasites of Plants and Insects, 2nd ed., by Mohammad Rafiq Siddiqi Genetics GenBank has unusually extensive coverage of Heteroderidae internal transcribed spacer Internal transcribed spacer (ITS) is the spacer DNA situated between the small-subunit ribosomal RNA (rRNA) and large-subunit rRNA genes in the chromosome or the corresponding transcribed region in the polycistronic rRNA precursor transcript. I ...s, most of which has been generated by Sergei Subbotin and collaborators (Subbotin et al. 1999, Clapp et al. 2000, Subbotin et al. 2000, Zeng et al. 2000, Subbotin et al. 2001, Amiri & Subbotin 2002, Subbotin et al. 2003). In total over of described Heteroderidae have some ITS data in GenBank. Overall Subbotin et al. find the preexisting taxonomy to fit very well with these sequences, w ...
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