Geotrichum Candidum
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Geotrichum Candidum
''Geotrichum candidum'' is a fungus which is a member of the human microbiome, notably associated with skin, sputum, and faeces where it occurs in 25–30% of specimens. It is common in soil and has been isolated from soil collected around the world, in all continents. ''G. candidum'' is the causative agent of the human disease geotrichosis, the plant disease sour rot which infects citrus fruits, tomatoes, carrots, and other vegetables. It can affect harvested fruit of durians such as ''Durio graveolens''. ''G. candidum'' is used widely in the production of certain dairy products including rind cheeses such as Camembert, Saint-Nectaire, Reblochon, and others. The fungus can also be found in a Nordic yogurt-like product known as viili where it is responsible for the product's velvety texture. In a 2001 study, ''G. candidum'' was found to consume the polycarbonate found in CDs. This effect was later replicated in 2021. History Taxonomy The genus ''Geotrichum'' was described b ...
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Johann Heinrich Friedrich Link
Johann Heinrich Friedrich Link (2 February 1767 – 1 January 1851) was a German naturalist and botanist. Biography Link was born at Hildesheim as a son of the minister August Heinrich Link (1738–1783), who taught him love of nature through collection of 'natural objects'. He studied medicine and natural sciences at the Hannoverschen Landesuniversität of Göttingen, and graduated as MD in 1789, promoting on his thesis ''"Flora der Felsgesteine rund um Göttingen"'' (Flora of the rocky beds around Göttingen). One of his teachers was the famous natural scientist Johann Friedrich Blumenbach (1752–1840). He became a private tutor (''Privatdozent'') in Göttingen. In 1792 he became the first professor of the new department of chemistry, zoology and botany at the University of Rostock. During his stay at Rostock, he became an early follower of the antiphlogistic theory of Lavoisier, teaching about the existence of oxygen instead of phlogiston. He was also a proponent of the ...
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Compact Disc
The compact disc (CD) is a Digital media, digital optical disc data storage format that was co-developed by Philips and Sony to store and play digital audio recordings. In August 1982, the first compact disc was manufactured. It was then released in October 1982 in Japan and branded as ''Compact Disc Digital Audio, Digital Audio Compact Disc''. The format was later adapted (as CD-ROM) for general-purpose data storage. Several other formats were further derived, including write-once audio and data storage (CD-R), rewritable media (CD-RW), Video CD (VCD), Super Video CD (SVCD), Photo CD, Picture CD, Compact Disc-Interactive (CD-i) and Enhanced Music CD. Standard CDs have a diameter of and are designed to hold up to 74 minutes of uncompressed stereo digital audio or about 650 mebibyte, MiB of data. Capacity is routinely extended to 80 minutes and 700 mebibyte, MiB by arranging data more closely on the same sized disc. The Mini CD has various diameters ranging from ; t ...
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Internal Transcribed Spacer
Internal transcribed spacer (ITS) is the spacer DNA situated between the small-subunit ribosomal RNA (rRNA) and large-subunit rRNA genes in the chromosome or the corresponding transcribed region in the polycistronic rRNA precursor transcript. ITS across life domains In bacteria and archaea, there is a single ITS, located between the 16S and 23S rRNA genes. Conversely, there are two ITSs in eukaryotes: ITS1 is located between 18S and 5.8S rRNA genes, while ITS2 is between 5.8S and 28S (in opisthokonts, or 25S in plants) rRNA genes. ITS1 corresponds to the ITS in bacteria and archaea, while ITS2 originated as an insertion that interrupted the ancestral 23S rRNA gene. Organization In bacteria and archaea, the ITS occurs in one to several copies, as do the flanking 16S and 23S genes. When there are multiple copies, these do not occur adjacent to one another. Rather, they occur in discrete locations in the circular chromosome. It is not uncommon in bacteria to carry tRN ...
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18S Ribosomal RNA
18S ribosomal RNA (abbreviated 18S rRNA) is a part of the ribosomal RNA. The S in 18S represents Svedberg units. 18S rRNA is an SSU rRNA, a component of the eukaryotic ribosomal small subunit (40S). 18S rRNA is the structural RNA for the small component of eukaryotic cytoplasmic ribosomes, and thus one of the basic components of all eukaryotic cells. 18S rRNA is the eukaryotic cytosolic homologue of 16S ribosomal RNA in prokaryotes and plastids. 18S rRNA is also a homologue of 12S ribosomal RNA in mitochondria. The genes coding for 18S rRNA are referred to as 18S rRNA genes. Sequence data from these genes is widely used in molecular analysis to reconstruct the evolutionary history of organisms, especially in vertebrates, as its slow evolutionary rate makes it suitable to reconstruct ancient divergences. Uses in phylogeny The small subunit (SSU) 18S rRNA gene is one of the most frequently used genes in phylogenetic studies and an important marker for random target polymerase ...
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Geotrichum Fici
Geotrichum is a genus of fungi found worldwide in soil, water, air, and sewage, as well as in plants, cereals, and dairy products; it is also commonly found in normal human flora and is isolated from sputum and feces. It was first described in 1809 by Johann Heinrich Friedrich Link. The genus ''Geotrichum'' includes over 100 species. Some are welcome and even considered desirable. For example, skilled cheesemakers create conditions favorable for the formation of a ''Geotrichum candidum'' rind on certain goat's milk and cow's milk cheeses, proudly declaring the rind to be the most flavorful part of such cheeses. Another example is the presence of some Geotrichum species in fermented poi. The most clinically relevant species is '' Saprochaeta capitata'', formerly known as ''Geotrichum capitatum'', with most cases occurring in Europe. '' Saprochaete clavata'', formerly known as '' Geotrichum clavatum'', is an uncommon infection that has been associated with sporadic outbreaks. ...
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Geotrichum Clavatum
Geotrichum is a genus of fungi found worldwide in soil, water, air, and sewage, as well as in plants, cereals, and dairy products; it is also commonly found in normal human flora and is isolated from sputum and feces. It was first described in 1809 by Johann Heinrich Friedrich Link. The genus ''Geotrichum'' includes over 100 species. Some are welcome and even considered desirable. For example, skilled cheesemakers create conditions favorable for the formation of a ''Geotrichum candidum'' rind on certain goat's milk and cow's milk cheeses, proudly declaring the rind to be the most flavorful part of such cheeses. Another example is the presence of some Geotrichum species in fermented poi. The most clinically relevant species is '' Saprochaeta capitata'', formerly known as ''Geotrichum capitatum'', with most cases occurring in Europe. '' Saprochaete clavata'', formerly known as '' Geotrichum clavatum'', is an uncommon infection that has been associated with sporadic outbreaks. ...
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Clade
A clade (), also known as a monophyletic group or natural group, is a group of organisms that are monophyletic – that is, composed of a common ancestor and all its lineal descendants – on a phylogenetic tree. Rather than the English term, the equivalent Latin term ''cladus'' (plural ''cladi'') is often used in taxonomical literature. The common ancestor may be an individual, a population, or a species (extinct or extant). Clades are nested, one in another, as each branch in turn splits into smaller branches. These splits reflect evolutionary history as populations diverged and evolved independently. Clades are termed monophyletic (Greek: "one clan") groups. Over the last few decades, the cladistic approach has revolutionized biological classification and revealed surprising evolutionary relationships among organisms. Increasingly, taxonomists try to avoid naming taxa that are not clades; that is, taxa that are not monophyletic. Some of the relationships between organisms ...
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Teleomorph, Anamorph And Holomorph
In mycology, the terms teleomorph, anamorph, and holomorph apply to portions of the life cycles of fungi in the phyla Ascomycota and Basidiomycota: *Teleomorph: the sexual reproductive stage (morph), typically a fruiting body. *Anamorph: an asexual reproductive stage (morph), often mold-like. When a single fungus produces multiple morphologically distinct anamorphs, these are called synanamorphs. *Holomorph: the whole fungus, including anamorphs and teleomorph. Dual naming of fungi Fungi are classified primarily based on the structures associated with sexual reproduction, which tend to be evolutionarily conserved. However, many fungi reproduce only asexually, and cannot easily be classified based on sexual characteristics; some produce both asexual and sexual states. These problematic species are often members of the Ascomycota, but a few of them belong to the Basidiomycota. Even among fungi that reproduce both sexually and asexually, often only one method of reproduction can be ...
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Ascus
An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or species can occur in numbers of one (e.g. ''Monosporascus cannonballus''), two, four, or multiples of four. In a few cases, the ascospores can bud off conidia that may fill the asci (e.g. ''Tympanis'') with hundreds of conidia, or the ascospores may fragment, e.g. some ''Cordyceps'', also filling the asci with smaller cells. Ascospores are nonmotile, usually single celled, but not infrequently may be coenocytic (lacking a septum), and in some cases coenocytic in multiple planes. Mitotic divisions within the developing spores populate each resulting cell in septate ascospores with nuclei. The term ocular chamber, or oculus, refers to the epiplasm (the portion of cytoplasm not used in ascospore formation) that is surrounded by the "bourrelet ...
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Hypha
A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one or more cells surrounded by a tubular cell wall. In most fungi, hyphae are divided into cells by internal cross-walls called "septa" (singular septum). Septa are usually perforated by pores large enough for ribosomes, mitochondria, and sometimes nuclei to flow between cells. The major structural polymer in fungal cell walls is typically chitin, in contrast to plants and oomycetes that have cellulosic cell walls. Some fungi have aseptate hyphae, meaning their hyphae are not partitioned by septa. Hyphae have an average diameter of 4–6 µm. Growth Hyphae grow at their tips. During tip growth, cell walls are extended by the external assembly and polymerization of cell wall components, and the internal production of new cell membrane. The S ...
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Dipodascus
''Dipodascus'' is a genus of fungi in the family Dipodascaceae The Dipodascaceae are a family of yeasts in the order Saccharomycetales. According to the 2007 Outline of Ascomycota, the family contains four genera; however, the placement of ''Sporopachydermia'' and ''Yarrowia'' is uncertain. GBIF accepted a .... References Saccharomycetes {{ascomycota-stub ...
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Basidiomycota
Basidiomycota () is one of two large divisions that, together with the Ascomycota, constitute the subkingdom Dikarya (often referred to as the "higher fungi") within the kingdom Fungi. Members are known as basidiomycetes. More specifically, Basidiomycota includes these groups: mushrooms, puffballs, stinkhorns, bracket fungi, other polypores, jelly fungi, boletes, chanterelles, earth stars, smuts, bunts, rusts, mirror yeasts, and ''Cryptococcus'', the human pathogenic yeast. Basidiomycota are filamentous fungi composed of hyphae (except for basidiomycota-yeast) and reproduce sexually via the formation of specialized club-shaped end cells called basidia that normally bear external meiospores (usually four). These specialized spores are called basidiospores. However, some Basidiomycota are obligate asexual reproducers. Basidiomycota that reproduce asexually (discussed below) can typically be recognized as members of this division by gross similarity to others, by the form ...
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