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Guyparkeria Halophila
''Guyparkeria'' is a genus in the '' Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halophilic and have varying degrees of thermophilicity. They live in environments with high concentrations of salt or other solutes, such as in hydrothermal vent plumes or in hypersaline playas, and do require high sodium ion concentrations in order to grow, as is also the case in the other genus of the same family, '' Thioalkalibacter'' Both species of this genus were originally published as members of the genus ''Thiobacillus'', before they were reclassified in 2000 to ''Halothiobacillus'',Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated generus ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. as '' Halothiobacillus halophilus'' and '' Halothiobacillus hydrothermalis'', bot ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Sink (geography)
An endorheic basin (; also spelled endoreic basin or endorreic basin) is a drainage basin that normally retains water and allows no outflow to other external bodies of water, such as rivers or oceans, but drainage converges instead into lakes or swamps, permanent or seasonal, that equilibrate through evaporation. They are also called closed or terminal basins, internal drainage systems, or simply basins. Endorheic regions contrast with exorheic regions. Endorheic water bodies include some of the largest lakes in the world, such as the Caspian Sea, the world's largest inland body of water. Basins with subsurface outflows which eventually lead to the ocean are generally not considered endorheic; they are cryptorheic. Endorheic basins constitute local base levels, defining a limit of erosion and deposition processes of nearby areas. Etymology The term was borrowed from French ''endor(rh)éisme'', coined from the combining form ''endo-'' (from grc, ἔνδον ''éndon'' 'with ...
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Halothiobacillus Hydrothermalis
''Halothiobacillus'' is a genus in the ''Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halotolerant; they live in environments with high concentrations of salt or other solutes, but don't require them in order to grow. The type species of this genus, ''Halothiobacillus neapolitanus'' used to be members of the genus ''Thiobacillus'', before they were reclassified in 2000.Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated genera ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. A further two former ''Thiobacillus'' spp. were also reclassified as '' Halothiobacillus halophilus'' and '' Halothiobacillus hydrothermalis'', both of which were obligate halophiles rather than being halotolerant and showed comparatively low 16S rRNA gene identity to ''Halothiobacillus ne ...
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Halothiobacillus Halophilus
''Halothiobacillus'' is a genus in the ''Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halotolerant; they live in environments with high concentrations of salt or other solutes, but don't require them in order to grow. The type species of this genus, ''Halothiobacillus neapolitanus'' used to be members of the genus ''Thiobacillus'', before they were reclassified in 2000.Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated genera ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. A further two former ''Thiobacillus'' spp. were also reclassified as '' Halothiobacillus halophilus'' and ''Halothiobacillus hydrothermalis'', both of which were obligate halophiles rather than being halotolerant and showed comparatively low 16S rRNA gene identity to ''Halothiobacillus nea ...
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Thermithiobacillus
''Thermithiobacillus'' is a genus of nonsporeforming, rod-shaped, Gram-negative bacteria. The name derives from the Latin ''thermae'', for warm baths, and the Classical Greek θείος, ''theios'' for sulfur. The type species of this genus was previously assigned to the genus ''Thiobacillus'', but it was reclassified on the basis of 16S rRNA analysis in 2000, creating this genus. A phylogenetic analysis, using 98 protein families confirmed this reassignment. This chemolithoautotrophic genus is obligately aerobic and moderately thermophilic (43-45 °C). The type species is Thermithiobacillus tepidarius (''Thermithiobacillus tepidarius''). ''Thermithiobacillus plumbiphilus ''Thermithiobacillus'' is a genus of nonsporeforming, rod-shaped, Gram-negative bacteria. The name derives from the Latin ''thermae'', for warm baths, and the Classical Greek θείος, ''theios'' for sulfur. The type species of this genus was ...'' was published in 2016. References External linksT ...
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Acidithiobacillus
''Acidithiobacillus'' is a genus of the ''Acidithiobacillia'' in the " Pseudomonadota". The genus includes acidophilic organisms capable of iron and/or sulfur oxidation. Like all ''"Pseudomonadota"'', ''Acidithiobacillus'' spp. are Gram-negative. They are also important generators of acid mine drainage, which is a major environmental problem around the world in mining. Genus ''Acidithiobacillus'' ''Acidithiobacillus'' are acidophilic obligate autotrophs (''Acidithiobacillus caldus'' can also grow mixotrophically) that use elementary sulfur, tetrathionate and ferrous iron as electron donors. They assimilate carbon from carbon dioxide using the transaldolase variant of the Calvin-Benson-Bassham cycle. The genus comprises motile, rod-shaped cells that can be isolated from low pH environments including low pH microenvironments on otherwise neutral mineral grains. Phylogeny The order Acidithiobacillales (i.e. ''Thermithiobacillus'') were formerly members of the ''Gammaproteobacter ...
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Halothiobacillus
''Halothiobacillus'' is a genus in the ''Gammaproteobacteria''. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halotolerant; they live in environments with high concentrations of salt or other solutes, but don't require them in order to grow. The type species of this genus, ''Halothiobacillus neapolitanus'' used to be members of the genus ''Thiobacillus'', before they were reclassified in 2000.Kelly, D.P., and Wood, A.P. "Reclassification of some species of ''Thiobacillus'' to the newly designated genera ''Acidithiobacillus'' gen. nov., ''Halothiobacillus'' gen. nov. and ''Thermithiobacillus'' gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500. A further two former ''Thiobacillus'' spp. were also reclassified as '' Halothiobacillus halophilus'' and '' Halothiobacillus hydrothermalis'', both of which were obligate halophiles rather than being halotolerant and showed comparatively low 16S rRNA gene identity to ''Halothiobacillus ne ...
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Thiobacillus
''Thiobacillus'' is a genus of Gram-negative Betaproteobacteria. '' Thiobacillus thioparus'' is the type species of the genus, and the type strain thereof is the StarkeyT strain, isolated by Robert Starkey in the 1930s from a field at Rutgers University in the United States of America. While over 30 "species" have been named in this genus since it was defined by Martinus Beijerinck in 1904, (the first strain was observed by the biological oceanographer Alexander Nathansohn in 1902 - likely what we would now call ''Halothiobacillus neapolitanus''), most names were never validly or effectively published. The remainder were either reclassified into ''Paracoccus'', '' Starkeya'' (both in the Alphaproteobacteria); '' Sulfuriferula'', ''Annwoodia'', ''Thiomonas'' (in the Betaproteobacteria); ''Halothiobacillus'', ''Guyparkeria'' (in the Gammaproteobacteria), or ''Thermithiobacillus'' or ''Acidithiobacillus'' (in the Acidithiobacillia). The very loosely defined "species" '' Thiobacillu ...
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Thioalkalibacter
''Thioalkalibacter'' is a faculatively alkaliphilic and halophilic genus of bacteria from the family of Thioalkalibacteraceae The ''Thioalkalibacteraceae'' are a family of extremophiles, namely halophilic, alkaliphilic or alkalitolerant, mesophilic to thermophilic obligately chemolithoautotrophic organisms in the '' Chromatiales'' comprising the genus '' Thioalkalibact ... with one known species ('' Thioalkalibacter halophilus''). References Thioalkalibacteraceae Bacteria genera Monotypic bacteria genera Taxa described in 2009 {{Chromatiales-stub ...
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Hypersaline
A hypersaline lake is a landlocked body of water that contains significant concentrations of sodium chloride, brines, and other salts, with saline levels surpassing that of ocean water (3.5%, i.e. ). Specific microbial species can thrive in high-salinity environments that are inhospitable to most lifeforms, including some that are thought to contribute to the colour of pink lakes. Some of these species enter a dormant state when desiccated, and some species are thought to survive for over 250 million years. The water of hypersaline lakes has great buoyancy due to its high salt content. Hypersaline lakes are found on every continent, especially in arid or semi-arid regions. In the Arctic, the Canadian Devon Ice Cap contains two subglacial lakes that are hypersaline. In Antarctica, there are larger hypersaline water bodies, lakes in the McMurdo Dry Valleys such as Lake Vanda with salinity of over 35% (i.e. 10 times as salty as ocean water). The most saline water body in the ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as ''Escherichia'', '' Salmonella'', ''Vibrio'', ''Yersinia'', ''Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (nonparasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the Internat ...
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Hydrothermal Vent
A hydrothermal vent is a fissure on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hotspots. Hydrothermal deposits are rocks and mineral ore deposits formed by the action of hydrothermal vents. Hydrothermal vents exist because the earth is both geologically active and has large amounts of water on its surface and within its crust. Under the sea, they may form features called black smokers or white smokers. Relative to the majority of the deep sea, the areas around hydrothermal vents are biologically more productive, often hosting complex communities fueled by the chemicals dissolved in the vent fluids. Chemosynthetic bacteria and Archaea form the base of the food chain, supporting diverse organisms, including giant tube worms, clams, limpets and shrimp. Active hydrothermal vents are thought to exist on Jupiter's moon Europa an ...
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