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Cafeteria Roenbergensis
''Cafeteria roenbergensis'' is a small bacterivorous marine flagellate. It was discovered by Danish marine ecologist Tom Fenchel and named by him and taxonomist David J. Patterson in 1988. It is in one of three genera of bicosoecids, and the first discovered of two known ''Cafeteria'' species. Bicosoecids belong to a broad group, the stramenopiles, also known as heterokonts (Heterokonta) that includes photosynthetic groups such as diatoms, brown, and golden algae, and non-photosynthetic groups such as opalinids, actinophryid "heliozoans", and oomycetes. The species is found primarily in coastal waters where there are high concentrations of bacteria on which it grazes. Its voracious appetite plays a significant role in regulating bacteria populations. Physiology ''Cafeteria roenbergensis'' is a slightly flattened, kidney-shaped bicosoecid. Its cell typically measures between 3 and 10 μm and it has a volume of around 20 μm³. It is colorless and has two unequally sized ...
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Cafeteria Roenbergensis Atcc50561 Protsville
A cafeteria, sometimes called a canteen outside the U.S., is a type of food service location in which there is little or no waiting staff table service, whether a restaurant or within an institution such as a large office building or school; a school dining location is also referred to as a dining hall or lunchroom (in American English). Cafeterias are different from coffeehouses, although the English term came from the Spanish ''cafetería'', same meaning. Instead of table service, there are food-serving counters/stalls or booths, either in a line or allowing arbitrary walking paths. Customers take the food that they desire as they walk along, placing it on a tray. In addition, there are often stations where customers order food, particularly items such as hamburgers or tacos which must be served hot and can be immediately prepared with little waiting. Alternatively, the patron is given a number and the item is brought to their table. For some food items and drinks, such a ...
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National University Of Ireland, Galway
The University of Galway ( ga, Ollscoil na Gaillimhe) is a public research university located in the city of Galway, Ireland. A tertiary education and research institution, the university was awarded the full five QS stars for excellence in 2012, and was ranked among the top 1 percent of universities in the 2018 ''QS World University Rankings''. The university was founded in 1845 as "Queen's College, Galway". It was known as "University College, Galway" (UCG) (Irish: ''Coláiste na hOllscoile, Gaillimh''), until 1997 and as "National University of Ireland, Galway" (NUI Galway) (Irish: ''Ollscoil na hÉireann, Gaillimh; OÉ Gaillimh''), until 2022. In late April 2022, it was announced that NUI Galway would be renamed "Ollscoil na Gaillimhe – University of Galway" in summer 2022, amid confusion over its proper title. University of Galway is a member of the Coimbra Group, a network of 40 long-established European universities. History The university was established in 1845 as ' ...
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Heterotrophic
A heterotroph (; ) is an organism that cannot produce its own food, instead taking nutrition from other sources of organic carbon, mainly plant or animal matter. In the food chain, heterotrophs are primary, secondary and tertiary consumers, but not producers. Living organisms that are heterotrophic include all animals and fungi, some bacteria and protists, and many parasitic plants. The term heterotroph arose in microbiology in 1946 as part of a classification of microorganisms based on their type of nutrition. The term is now used in many fields, such as ecology in describing the food chain. Heterotrophs may be subdivided according to their energy source. If the heterotroph uses chemical energy, it is a chemoheterotroph (e.g., humans and mushrooms). If it uses light for energy, then it is a photoheterotroph (e.g., green non-sulfur bacteria). Heterotrophs represent one of the two mechanisms of nutrition (trophic levels), the other being autotrophs (''auto'' = self, ''troph'' = n ...
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Mavirus
''Mavirus'' is a genus of double stranded DNA virus that can infect the marine phagotrophic flagellate ''Cafeteria roenbergensis'', but only in the presence of the giant ''CroV'' virus (''Cafeteria roenbergensis''). The genus contains only one species, ''Cafeteriavirus-dependent mavirus''. ''Mavirus'' can integrate into the genome of cells of ''C. roenbergensis'', and thereby confer immunity to the population The name is derived from Maverick virus. The virophage was discovered by Matthias G. Fischer of the University of British Columbia while he was working on Cafeteria roenbergensis virus as part of his PhD. __TOC__ Virology The genome is 19,063 bases in length and encodes 20 predicted coding sequences. Seven have homology to the Maverick/Polinton family of transposons. The genome encodes a retroviral integrase, an adenosine triphosphatase (ATPase), a cysteine protease and a protein primed DNA polymerase B. Classification ''Mavirus'' is a genus in the family ''Lavidaviri ...
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Mavirus Virophage
''Mavirus'' is a genus of double stranded DNA virus that can infect the marine phagotrophic flagellate ''Cafeteria roenbergensis'', but only in the presence of the giant ''CroV'' virus (''Cafeteria roenbergensis''). The genus contains only one species, ''Cafeteriavirus-dependent mavirus''. ''Mavirus'' can integrate into the genome of cells of ''C. roenbergensis'', and thereby confer immunity to the population The name is derived from Maverick virus. The virophage was discovered by Matthias G. Fischer of the University of British Columbia while he was working on Cafeteria roenbergensis virus as part of his PhD. __TOC__ Virology The genome is 19,063 bases in length and encodes 20 predicted coding sequences. Seven have homology to the Maverick/Polinton family of transposons. The genome encodes a retroviral integrase, an adenosine triphosphatase ( ATPase), a cysteine protease and a protein primed DNA polymerase B. Classification ''Mavirus'' is a genus in the family ''Lavidavi ...
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CroV
''Cafeteria roenbergensis virus'' (CroV) is a giant virus that infects the marine bicosoecid flagellate ''Cafeteria roenbergensis'', a member of the microzooplankton community. History The virus was isolated from seawater samples collected from the Gulf of Mexico during 1989 to 1991, on a flagellate host that was misidentified as belonging to the genus ''Bodo''; hence the original designation of the virus as BV-PW1. The virus was shown to be about 300 nm in diameter and have a complex internal structure, as well as evidence of a putative tail-like structure Further work on the virus indicated that the host was an isolate of the genus ''Cafeteria'' and that the genome had a G+C content of ~34%. Further analysis suggested that the helicase of the virus was phylogenetically related to those found in the family '' Asfarviridae'', and that the virus shared properties with members of the Nucleocytoplasmic large DNA viruses group. CroV has one of the largest genomes of all marine ...
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Proceedings Of The National Academy Of Sciences
''Proceedings of the National Academy of Sciences of the United States of America'' (often abbreviated ''PNAS'' or ''PNAS USA'') is a peer-reviewed multidisciplinary scientific journal. It is the official journal of the National Academy of Sciences, published since 1915, and publishes original research, scientific reviews, commentaries, and letters. According to ''Journal Citation Reports'', the journal has a 2021 impact factor of 12.779. ''PNAS'' is the second most cited scientific journal, with more than 1.9 million cumulative citations from 2008 to 2018. In the mass media, ''PNAS'' has been described variously as "prestigious", "sedate", "renowned" and "high impact". ''PNAS'' is a delayed open access journal, with an embargo period of six months that can be bypassed for an author fee ( hybrid open access). Since September 2017, open access articles are published under a Creative Commons license. Since January 2019, ''PNAS'' has been online-only, although print issues are a ...
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Cafeteria Roenbergensis Virus
''Cafeteria roenbergensis virus'' (CroV) is a giant virus that infects the marine bicosoecid flagellate ''Cafeteria roenbergensis'', a member of the microzooplankton community. History The virus was isolated from seawater samples collected from the Gulf of Mexico during 1989 to 1991, on a flagellate host that was misidentified as belonging to the genus ''Bodo''; hence the original designation of the virus as BV-PW1. The virus was shown to be about 300 nm in diameter and have a complex internal structure, as well as evidence of a putative tail-like structure Further work on the virus indicated that the host was an isolate of the genus ''Cafeteria'' and that the genome had a G+C content of ~34%. Further analysis suggested that the helicase of the virus was phylogenetically related to those found in the family '' Asfarviridae'', and that the virus shared properties with members of the Nucleocytoplasmic large DNA viruses group. CroV has one of the largest genomes of all marine ...
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Ecological Niche
In ecology, a niche is the match of a species to a specific environmental condition. Three variants of ecological niche are described by It describes how an organism or population responds to the distribution of resources and competitors (for example, by growing when resources are abundant, and when predators, parasites and pathogens are scarce) and how it in turn alters those same factors (for example, limiting access to resources by other organisms, acting as a food source for predators and a consumer of prey). "The type and number of variables comprising the dimensions of an environmental niche vary from one species to another ndthe relative importance of particular environmental variables for a species may vary according to the geographic and biotic contexts". See also Chapter 2: Concepts of niches, pp. 7 ''ff'' A Grinnellian niche is determined by the habitat in which a species lives and its accompanying behavioral adaptations. An Eltonian niche emphasizes that a spec ...
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Limiting Factor
A limiting factor is a variable of a system that causes a noticeable change in output or another measure of a type of system. The limiting factor is in a pyramid shape of organisms going up from the producers to consumers and so on. A factor not limiting over a certain domain of starting conditions may yet be limiting over another domain of starting conditions, including that of the factor. Overview The identification of a factor as limiting is possible only in distinction to one or more other factors that are non-limiting. Disciplines differ in their use of the term as to whether they allow the simultaneous existence of more than one limiting factor which (may then be called "co-limiting"), but they all require the existence of at least one non-limiting factor when the terms are used. There are several different possible scenarios of limitation when more than one factor is present. The first scenario, called ''single limitation'' occurs when only one factor, the one with maximum ...
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Flagellates
A flagellate is a cell or organism with one or more whip-like appendages called flagella. The word ''flagellate'' also describes a particular construction (or level of organization) characteristic of many prokaryotes and eukaryotes and their means of motion. The term presently does not imply any specific relationship or classification of the organisms that possess flagella. However, the term "flagellate" is included in other terms (such as "dinoflagellate" and "choanoflagellata") which are more formally characterized. Form and behavior Flagella in eukaryotes are supported by microtubules in a characteristic arrangement, with nine fused pairs surrounding two central singlets. These arise from a basal body. In some flagellates, flagella direct food into a cytostome or mouth, where food is ingested. Flagella often support hairs, called mastigonemes, or contain rods. Their ultrastructure plays an important role in classifying eukaryotes. Among protoctists and microscopic anima ...
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Microbial Ecology (journal)
Microbial ecology (or environmental microbiology) is the ecology of microorganisms: their relationship with one another and with their environment. It concerns the three major domains of life— Eukaryota, Archaea, and Bacteria—as well as viruses. Microorganisms, by their omnipresence, impact the entire biosphere. Microbial life plays a primary role in regulating biogeochemical systems in virtually all of our planet's environments, including some of the most extreme, from frozen environments and acidic lakes, to hydrothermal vents at the bottom of deepest oceans, and some of the most familiar, such as the human small intestine. As a consequence of the quantitative magnitude of microbial life (calculated as cells; eight orders of magnitude greater than the number of stars in the observable universe) microbes, by virtue of their biomass alone, constitute a significant carbon sink. Aside from carbon fixation, microorganisms' key collective metabolic processes (including ...
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