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BioCatalogue
The BioCatalogue is a curated catalogue of Life Science Web Services. The BioCatalogue was launched in June 2009 at the Intelligent Systems for Molecular Biology Conference. The project is a collaboration between the myGrid project at the University of Manchester led by Carole Goble and the European Bioinformatics Institute led by Rodrigo Lopez. It is funded by the Biotechnology and Biological Sciences Research Council. The BioCatalogue is based on an open source Ruby on Rails codebase like its sister project, myExperiment myExperiment is a social web site for researchers sharing research objects such as scientific workflows. The myExperiment website was launched in November 2007 and contains a significant collection of scientific workflows for a variety of workfl .... References {{reflist Further reading Khalid Belhajjame, Carole Goble, Franck Tanoh, et al. Biocatalogue: A Curated Web Service Registry for the Life Science Community, Microsoft eScience conference 2008Goble ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
MyGrid
The myGrid consortium produces and uses a suite of tools design to “help e-Scientists get on with science and get on with scientists”. The tools support the creation of e-laboratories and have been used in domains as diverse as systems biology, social science, music, astronomy, multimedia and chemistry. The consortium is led by Carole Goble of the Department of Computer Science at the University of Manchester, UK. Tools produced and used by myGrid Tools developed by the myGrid consortium include: * The Taverna workbench for designing, editing and executing scientific workflows * myExperiment for sharing workflows and related data * BioCatalogue a public registry of Web services for Life Scientists * Seek produced in collaboration with the SysModb: Systems Biology of Micro-Organisms DataBase Finding, sharing and exchanging data, models and processes in Systems Biology * MethodBox Browse datasets and share knowledge. * RightField Sharing the meaning of your data by embedd ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Carole Goble
Carole Anne Goble, (born 10 April 1961) is a British academic who is Professor of Computer Science at the University of Manchester. She is principal investigator (PI) of the myGrid, BioCatalogue and myExperiment projects and co-leads the Information Management Group (IMG) with Norman Paton. Education Goble was educated at Maidstone School for Girls. Her academic career has been spent at the Department of Computer Science where she gained her Bachelor of Science degree in computing and information systems from 1979 to 1982. Research and career Her current research interests include Grid computing, the Semantic Grid, the Semantic Web, Ontologies, e-Science, medical informatics, Bioinformatics, and Research Objects. She applies advances in knowledge technologies and workflow systems to solve information management problems for life scientists and other scientific disciplines. She has successfully secured funding from the European Union, the Defense Advanced Research Projects ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Biotechnology And Biological Sciences Research Council
Biotechnology and Biological Sciences Research Council (BBSRC), part of UK Research and Innovation, is a non-departmental public body (NDPB), and is the largest UK public funder of non-medical bioscience. It predominantly funds scientific research institutes and university research departments in the UK. Purpose Receiving its funding through the science budget of the Department for Business, Energy and Industrial Strategy (BEIS), BBSRC's mission is to "promote and support, by any means, high-quality basic, strategic and applied research and related postgraduate training relating to the understanding and exploitation of biological systems". Structure BBSRC's head office is at Polaris House in Swindon - the same building as the other councils of UK Research and Innovation, AHRC EPSRC, ESRC, Innovate UK, MRC, NERC, Research England and STFC, as well as the UKSA. Funded by Government, BBSRC invested over £498 million in bioscience in 2017–18. BBSRC also manages the joint ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Biological Databases
Biological databases are libraries of biological sciences, collected from scientific experiments, published literature, high-throughput experiment technology, and computational analysis. They contain information from research areas including genomics, proteomics, metabolomics, microarray gene expression, and phylogenetics. Information contained in biological databases includes gene function, structure, localization (both cellular and chromosomal), clinical effects of mutations as well as similarities of biological sequences and structures. Biological databases can be classified by the kind of data they collect (see below). Broadly, there are molecular databases (for sequences, molecules, etc.), functional databases (for physiology, enzyme activities, phenotypes, ecology etc), taxonomic databases (for species and other taxonomic ranks), images and other media, or specimens (for museum collections etc.) Databases are important tools in assisting scientists to analyze and explain ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bioinformatics Organizations
Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combines biology, chemistry, physics, computer science, information engineering, mathematics and statistics to analyze and interpret the biological data. Bioinformatics has been used for '' in silico'' analyses of biological queries using computational and statistical techniques. Bioinformatics includes biological studies that use computer programming as part of their methodology, as well as specific analysis "pipelines" that are repeatedly used, particularly in the field of genomics. Common uses of bioinformatics include the identification of candidates genes and single nucleotide polymorphisms (SNPs). Often, such identification is made with the aim to better understand the genetic basis of disease, unique adaptations, desirable properties (esp ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
MyExperiment
myExperiment is a social web site for researchers sharing research objects such as scientific workflows. The myExperiment website was launched in November 2007 and contains a significant collection of scientific workflows for a variety of workflow systems, most notably Taverna, but also other tools such as Bioclipse. myExperiment has a REST API and is based on an open source Ruby on Rails codebase. It supports Linked data and has a SPARQL Endpoint, with ainteractive tutorial The myExperiment project is directed by David De Roure at University of Oxford and is one of the activities of the myGrid consortium led by Carole Goble of The University of Manchester, UK and of the-Research SouthUK regional consortium led by thOxford e-Research Centre It was originally funded by Jisc under the Virtual Research Environment programme and by the Microsoftbr>Technical Computing Initiative myExperiment is being enhanced by the workflows for ever project (Wf4Ever) which aims to provide new fea ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Ruby On Rails
Ruby on Rails (simplified as Rails) is a server-side web application framework written in Ruby under the MIT License. Rails is a model–view–controller (MVC) framework, providing default structures for a database, a web service, and web pages. It encourages and facilitates the use of web standards such as JSON or XML for data transfer and HTML, CSS and JavaScript for user interfacing. In addition to MVC, Rails emphasizes the use of other well-known software engineering patterns and paradigms, including convention over configuration (CoC), don't repeat yourself (DRY), and the active record pattern. Ruby on Rails' emergence in 2005 greatly influenced web app development, through innovative features such as seamless database table creations, migrations, and scaffolding of views to enable rapid application development. Ruby on Rails' influence on other web frameworks remains apparent today, with many frameworks in other languages borrowing its ideas, including Django in Pyt ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Open-source License
An open-source license is a type of license for computer software and other products that allows the source code, blueprint or design to be used, modified and/or shared under defined terms and conditions. This allows end users and commercial companies to review and modify the source code, blueprint or design for their own customization, curiosity or troubleshooting needs. Open-source licensed software is mostly available free of charge, though this does not necessarily have to be the case. Licenses which only permit non-commercial redistribution or modification of the source code for personal use only are generally not considered as open-source licenses. However, open-source licenses may have some restrictions, particularly regarding the expression of respect to the origin of software, such as a requirement to preserve the name of the authors and a copyright statement within the code, or a requirement to redistribute the licensed software only under the same license (as in a copy ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
European Bioinformatics Institute
The European Bioinformatics Institute (EMBL-EBI) is an Intergovernmental Organization (IGO) which, as part of the European Molecular Biology Laboratory (EMBL) family, focuses on research and services in bioinformatics. It is located on the Wellcome Genome Campus in Hinxton near Cambridge, and employs over 600 full-time equivalent (FTE) staff. Institute leaders such as Rolf Apweiler, Alex Bateman, Ewan Birney, and Guy Cochrane, an adviser on the National Genomics Data Center Scientific Advisory Board, serve as part of the international research network of the BIG Data Center at the Beijing Institute of Genomics. Additionally, the EMBL-EBI hosts training programs that teach scientists the fundamentals of the work with biological data and promote the plethora of bioinformatic tools available for their research, both EMBL-EBI and non-EMBL-EBI-based. Bioinformatic services One of the roles of the EMBL-EBI is to index and maintain biological data in a set of databases, including E ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Department Of Computer Science, University Of Manchester
The Department of Computer Science at the University of Manchester is the longest established department of Computer Science in the United Kingdom and one of the largest. It is located in the Kilburn Building on the Oxford Road and currently has over 800 students taking a wide range of undergraduate and postgraduate courses and 60 full-time academic staff. Teaching and study Undergraduate The Department currently offers a wide range of undergraduate courses from Bachelor of Science (BSc), Bachelor of Engineering (BEng) and Master of Engineering (MEng). These are available as single honours or as joint honours degrees within the themes of Artificial Intelligence, Computer Science, Computer systems engineering, Software engineering, Mathematics, Internet Computing, Business applications and Management. Industrial placements are offered with all undergraduate courses. Postgraduate At postgraduate level the department offers taught Master of Science (MSc) degrees, at a ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
University Of Manchester
, mottoeng = Knowledge, Wisdom, Humanity , established = 2004 – University of Manchester Predecessor institutions: 1956 – UMIST (as university college; university 1994) 1904 – Victoria University of Manchester 1880 – Victoria University 1851 – Owens College 1824 – Manchester Mechanics' Institute , endowment = £242.2 million (2021) , budget = £1.10 billion (2020–21) , chancellor = Nazir Afzal (from August 2022) , head_label = President and vice-chancellor , head = Nancy Rothwell , academic_staff = 5,150 (2020) , total_staff = 12,920 (2021) , students = 40,485 (2021) , undergrad = () , postgrad = () , city = Manchester , country = England, United Kingdom , campus = Urban and suburban , colours = Manchester Purple Manchester Yellow , free_label = Scarf , free = , website = , logo = UniOfManchesterLogo.svg , affiliations = Universities Research Association Sutton 30 Russell Group EUA N8 Group NWUA ACUUniversities UK The Universit ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
