Acidimicrobiia
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Acidimicrobiia
The ''Acidimicrobiia'' are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, ''Acidimicrobium ferrooxidans'' is the type species of the order. Phylogeny Taxonomy The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). * Order " Actinomarinales" Ghai et al. 2013 ** Family " Actinomarinaceae" Ghai et al. 2013 *** Genus "''Candidatus'' Actinomarina" Ghai et al. 2013 * Order Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997 ** Genus ?'' Acidithiomicrobium'' Davis-Belmar & Norris 2009 ** Family Acidimicrobiaceae Stackebrandt, Rainey & Ward-Rainey 1997 *** Genus ?'' Acidiferrimicrobium'' González et al. 2020 *** Genus ?''Aciditerrimonas'' Itoh et al. 2011 *** Genus ''Acidimicrobium'' Clark & Norris 1996 *** Genus "'' Acidithrix''" Kay et al. 2013/Jones & Johnson 2015 *** Genus '' Ferrimicrobium'' Johnson et ...
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Microthrix
The ''Acidimicrobiia'' are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, ''Acidimicrobium ferrooxidans'' is the type species of the order. Phylogeny Taxonomy The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). * Order " Actinomarinales" Ghai et al. 2013 ** Family " Actinomarinaceae" Ghai et al. 2013 *** Genus "''Candidatus'' Actinomarina" Ghai et al. 2013 * Order Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997 ** Genus ?'' Acidithiomicrobium'' Davis-Belmar & Norris 2009 ** Family Acidimicrobiaceae Stackebrandt, Rainey & Ward-Rainey 1997 *** Genus ?'' Acidiferrimicrobium'' González et al. 2020 *** Genus ?''Aciditerrimonas'' Itoh et al. 2011 *** Genus '' Acidimicrobium'' Clark & Norris 1996 *** Genus "'' Acidithrix''" Kay et al. 2013/Jones & Johnson 2015 *** Genus '' Ferrimicrobium'' Johnson e ...
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Acidimicrobiales
The ''Acidimicrobiia'' are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, ''Acidimicrobium ferrooxidans'' is the type species of the order. Phylogeny Taxonomy The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). * Order " Actinomarinales" Ghai et al. 2013 ** Family " Actinomarinaceae" Ghai et al. 2013 *** Genus "''Candidatus'' Actinomarina" Ghai et al. 2013 * Order Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997 ** Genus ?'' Acidithiomicrobium'' Davis-Belmar & Norris 2009 ** Family Acidimicrobiaceae Stackebrandt, Rainey & Ward-Rainey 1997 *** Genus ?'' Acidiferrimicrobium'' González et al. 2020 *** Genus ?''Aciditerrimonas'' Itoh et al. 2011 *** Genus ''Acidimicrobium'' Clark & Norris 1996 *** Genus "'' Acidithrix''" Kay et al. 2013/Jones & Johnson 2015 *** Genus '' Ferrimicrobium'' Johnson et ...
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Actinomycetota
The ''Actinomycetota'' (or ''Actinobacteria'') are a phylum of all gram-positive bacteria. They can be terrestrial or aquatic. They are of great economic importance to humans because agriculture and forests depend on their contributions to soil systems. In soil they help to decompose the organic matter of dead organisms so the molecules can be taken up anew by plants. While this role is also played by fungi, ''Actinomycetota'' are much smaller and likely do not occupy the same ecological niche. In this role the colonies often grow extensive mycelia, like a fungus would, and the name of an important order of the phylum, '' Actinomycetales'' (the actinomycetes), reflects that they were long believed to be fungi. Some soil actinomycetota (such as ''Frankia'') live symbiotically with the plants whose roots pervade the soil, fixing nitrogen for the plants in exchange for access to some of the plant's saccharides. Other species, such as many members of the genus '' Mycobacterium'', ar ...
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Acidithrix
''Acidithrix ferrooxidans'' (''A. ferrooxidans'') is a heterotrophic, acidophilic and Gram-positive bacterium from the genus ''Acidithrix''. The type strain of this species, ''A. ferrooxidans'' Py-F3, was isolated from an acidic stream draining from a copper mine in Wales. This species grows in a variety of acidic environments such as streams, mines or geothermal sites. Mine lakes with a redoxcline support growth with ferrous iron as the electron donor. "''A. ferrooxidans''" grows rapidly in macroscopic streamer, producing greater cell densities than other streamer-forming microbes. Use in a bioreactors to remediate mine waste has been proposed due to cell densities and rapid oxidation of ferrous iron oxidation in acidic mine drainage. Exopolysaccharide production during metal substrate metabolism, such as iron oxidation helps to prevent cell encrustation by minerals. Isolates/Sequencing Isolate Py-F3 Type strain Py-F3 was isolated from acidic, metal-rich mine waters in No ...
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National Center For Biotechnology Information
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The NCBI is located in Bethesda, Maryland, and was founded in 1988 through legislation sponsored by US Congressman Claude Pepper. The NCBI houses a series of databases relevant to biotechnology and biomedicine and is an important resource for bioinformatics tools and services. Major databases include GenBank for DNA sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are available online through the Entrez search engine. NCBI was directed by David Lipman, one of the original authors of the BLAST sequence alignment program and a widely respected figure in bioinformatics. GenBank NCBI had responsibility for making available the GenBank DNA seque ...
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