|
Anne O'Tate
Anne O'Tate is a free, web-based application that analyses sets of records identified on PubMed, the bibliographic database of articles from over 5,500 biomedical journals worldwide. While PubMed has its own wide range of search options to identify sets of records relevant to a researchers query it lacks the ability to analyse these sets of records further, a process for which the terms text mining and drill down have been used. Anne O'Tate is able to perform such analysis and can process sets of up to 25,000 PubMed records. Description Once a set of articles has been identified using Anne O’Tate with its PubMed-like interface and search syntax, the set can be analysed and words and concepts mentioned in specific 'fields' (sections) of PubMed records can be displayed in order of frequency. ‘Fields’ which Anne O’Tate can display in this manner are: Topics (MeSH) This option may help to identify possible Medical Subject Headings (known as MeSH terms, but called ‘Topics� ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
PubMed
PubMed is an openly accessible, free database which includes primarily the MEDLINE database of references and abstracts on life sciences and biomedical topics. The United States National Library of Medicine (NLM) at the National Institutes of Health maintains the database as part of the Entrez system of information retrieval. From 1971 to 1997, online access to the MEDLINE database was provided via computer and phone lines primarily through institutional facilities, such as university libraries. PubMed, first released in January 1996, ushered in the era of private, free, home- and office-based MEDLINE searching. The PubMed system was offered free to the public starting in June 1997. Content In addition to MEDLINE, PubMed provides access to: * older references from the print version of '' Index Medicus'', back to 1951 and earlier * references to some journals before they were indexed in Index Medicus and MEDLINE, for instance ''Science'', '' BMJ'', and ''Annals of Surg ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bibliographic Database
A bibliographic database is a database of bibliographic records. This is an organised online collection of references to published written works like academic journal, journal and newspaper articles, conference proceedings, reports, government and legal publications, patents and books. In contrast to library catalogue entries, a majority of the records in bibliographic databases describe articles and conference papers rather than complete monographs, and they generally contain very rich subject descriptions in the form of Index term, keywords, subject classification terms, or abstract (summary), abstracts. A bibliographic database may cover a wide range of topics or one academic discipline, academic field like computer science. A significant number of bibliographic databases are marketed under a trade name by licensing agreement from vendors, or directly from their makers: the indexing and abstracting services. Many bibliographic databases have evolved into digital library, digit ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Text Mining
Text mining, text data mining (TDM) or text analytics is the process of deriving high-quality information from text. It involves "the discovery by computer of new, previously unknown information, by automatically extracting information from different written resources." Written resources may include websites, books, emails, reviews, and articles. High-quality information is typically obtained by devising patterns and trends by means such as statistical pattern learning. According to Hotho et al. (2005), there are three perspectives of text mining: information extraction, data mining, and knowledge discovery in databases (KDD). Text mining usually involves the process of structuring the input text (usually parsing, along with the addition of some derived linguistic features and the removal of others, and subsequent insertion into a database), deriving patterns within the structured data, and finally evaluation and interpretation of the output. 'High quality' in text mining usually ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Drill Down
Data drilling (also drilldown) refers to any of various operations and transformations on tabular, relational, and multidimensional data. The term has widespread use in various contexts, but is primarily associated with specialized software designed specifically for data analysis. Common data drilling operations There are certain operations that are common to applications that allow data drilling. Among them are: Query operations: * tabular query * pivot query Tabular query Tabular query operations consist of standard operations on data tables. Among these operations are: * search * sort * filter (by value) * filter (by extended function or condition) * transform (e.g., by adding or removing columns) Consider the following example: Fred and Wilma table (Fig 001): gender, fname, lname, home male, fred, chopin, Poland male, fred, flintstone, bedrock male, fred, durst, usa female, wilma, flintstone, bedrock female, wilma, rudolph, usa female, wil ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Medical Subject Headings
Medical Subject Headings (MeSH) is a comprehensive controlled vocabulary for the purpose of indexing Academic journal, journal articles and books in the Life science, life sciences. It serves as a thesaurus of index terms that facilitates searching. Created and updated by the United States National Library of Medicine (NLM), it is used by the MEDLINE/PubMed article database and by NLM's catalog of book holdings. MeSH is also used by ClinicalTrials.gov registry to classify which diseases are studied by trials registered in ClinicalTrials. MeSH was introduced in the 1960s, with the NLM's own index catalogue and the subject headings of the Quarterly Cumulative Index Medicus (1940 edition) as precursors. The yearly printed version of MeSH was discontinued in 2007; MeSH is now available only online. It can be browsed and downloaded free of charge through PubMed. Originally in English, MeSH has been translated into numerous other languages and allows retrieval of documents from differ ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
MEDLINE
MEDLINE (Medical Literature Analysis and Retrieval System Online, or MEDLARS Online) is a bibliographic database of life sciences and biomedical information. It includes bibliographic information for articles from academic journals covering medicine, nursing, pharmacy, dentistry, veterinary medicine, and health care. MEDLINE also covers much of the literature in biology and biochemistry, as well as fields such as molecular evolution. Compiled by the United States National Library of Medicine (NLM), MEDLINE is freely available on the Internet and searchable via PubMed and NLM's National Center for Biotechnology Information's Entrez system. History MEDLARS (Medical Literature Analysis and Retrieval System) was a computerised biomedical bibliographic retrieval system. It was launched by the National Library of Medicine in 1964 and was the first large-scale, computer-based, retrospective search service available to the general public. Initial development of MEDLARS Since ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
University Of Chicago
The University of Chicago (UChicago, Chicago, or UChi) is a Private university, private research university in Chicago, Illinois, United States. Its main campus is in the Hyde Park, Chicago, Hyde Park neighborhood on Chicago's South Side, Chicago, South Side, near the shore of Lake Michigan about from Chicago Loop, the Loop. The university is composed of an College of the University of Chicago, undergraduate college and four graduate divisions: Biological Science, Arts & Humanities, Physical Science, and Social Science, which include various organized departments and institutes. In addition, the university operates eight professional schools in the fields of University of Chicago Booth School of Business, business, Crown Family School of Social Work, Policy, and Practice, social work, University of Chicago Divinity School, divinity, Graham School of Continuing Liberal and Professional Studies, continuing studies, Harris School of Public Policy, public policy, University of Chi ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Biomedical Text Mining
Biomedical text mining (including biomedical natural language processing or BioNLP) refers to the methods and study of how text mining may be applied to texts and literature of the biomedical domain. As a field of research, biomedical text mining incorporates ideas from natural language processing, bioinformatics, medical informatics and computational linguistics. The strategies in this field have been applied to the biomedical literature available through services such as PubMed. In recent years, the scientific literature has shifted to electronic publishing but the volume of information available can be overwhelming. This revolution of publishing has caused a high demand for text mining techniques. Text mining offers information retrieval (IR) and entity recognition (ER). IR allows the retrieval of relevant papers according to the topic of interest, e.g. through PubMed. ER is practiced when certain biological terms are recognized (e.g. proteins or genes) for further processing. ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Don R
Don, don or DON and variants may refer to: Places *Don (river), a river in European Russia *Don River (other), several other rivers with the name * Don, Benin, a town in Benin * Don, Dang, a village and hill station in Dang district, Gujarat, India * Don, Nord, a ''commune'' of the Nord ''département'' in northern France *Don, Tasmania, a small village on the Don River, located just outside Devonport, Tasmania *Don, Trentino, a commune in Trentino, Italy *Don, West Virginia, a community in the United States * Don Republic, a temporary state in 1918–1920 *Don Jail, a jail in Toronto, Canada *DON, Chapman code for County Donegal, Ireland People and characters Role or title *Don (honorific), a Spanish, Portuguese, and Italian title, given as a mark of respect * Don (academia), a fellow or tutor of a college or university in the U.K. and elsewhere *Don, a crime boss, especially in the Mafia People with the name *Don (given name), a short form of the masculine given name ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
University Of Illinois At Chicago
The University of Illinois Chicago (UIC) is a public research university in Chicago, Illinois, United States. Its campus is in the Near West Side community area, adjacent to the Chicago Loop. The second campus established under the University of Illinois system, UIC is also the largest university in the Chicago metropolitan area, having more than 33,000 students enrolled in 16 colleges. It is classified among "R1: Doctoral Universities – Very high research activity." UIC competes in NCAA Division I Missouri Valley Conference. History Beginnings The University of Illinois Chicago traces its origins to several health colleges founded during the late 19th century, including the Chicago College of Pharmacy, which opened in 1859, the College of Physicians and Surgeons (1882), and the Columbian College of Dentistry (1893). The University of Illinois was chartered in 1867 in Champaign-Urbana, as the state's land-grant university. In exchange for agreeing to the Champaign-Ur ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
National Institutes Of Health
The National Institutes of Health (NIH) is the primary agency of the United States government responsible for biomedical and public health research. It was founded in 1887 and is part of the United States Department of Health and Human Services (HHS). Many NIH facilities are located in Bethesda, Maryland, and other nearby suburbs of the Washington metropolitan area, with other primary facilities in the Research Triangle Park in North Carolina and smaller satellite facilities located around the United States. The NIH conducts its scientific research through the NIH Intramural Research Program (IRP) and provides significant biomedical research funding to non-NIH research facilities through its Extramural Research Program. , the IRP had 1,200 principal investigators and more than 4,000 postdoctoral fellows in basic, translational, and clinical research, being the largest biomedical research institution in the world, while, as of 2003, the extramural arm provided 28% of biomedical ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
GoPubMed
GoPubMed was a knowledge-based search engine for biomedical texts. The Gene Ontology (GO) and Medical Subject Headings (MeSH) served as "Table of contents" in order to structure the millions of articles in the MEDLINE database. MeshPubMed was at one point a separate project, but the two were merged. The technologies used in GoPubMed were generic and could in general be applied to any kind of texts and any kind of knowledge bases. The system was developed at the Technische Universität Dresden by Michael Schroeder and his team at Transinsight. GoPubMed was recognized with the 2009 red dot: best of the best award in the category communication design – graphical user interfaces and interactive tool. Transinsight was recognized with the German Innovation Prize IT for its developments in Enterprise Semantic Intelligence at CeBIT CeBIT was a computer expo which, at its peak, was the largest and most internationally representative. The trade fair was held each year on the H ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
